https://gregorgorjanc.r-universe.devRecent package updates in gregorgorjancR-universehttps://github.com/gregorgorjanc.pnghttps://gregorgorjanc.r-universe.devThu, 20 Aug 2026 20:55:41 GMTgregor.gorjanc@gmail.com (Gregor Gorjanc)'Tskit' enables efficient storage, manipulation, and analysis of ancestral recombination graphs (ARGs) using succinct tree sequence encoding. The tree sequence encoding of an ARG is described in Wong et al. (2024) <doi:10.1093/genetics/iyae100>, while 'tskit' project is described in Jeffrey et al. (2026) <doi:10.48550/arXiv.2602.09649>. See also <https://tskit.dev> for project news, documentation, and tutorials. 'Tskit' provides 'Python', 'C', and 'Rust' application programming interfaces (APIs). The 'Python' API can be called from 'R' via the 'reticulate' package to load and analyse tree sequences as described at <https://tskit.dev/tutorials/tskitr.html>. 'RcppTskit' provides 'R' access to the 'tskit C' API for cases where the 'reticulate' option is not optimal; for example, high-performance or low-level work with tree sequences. Currently, 'RcppTskit' provides a limited set of functions because the 'Python' API and 'reticulate' already cover most needs. The provided 'RcppTskit R' API mirrors the 'tskit Python' API, while the 'RcppTskit C++' API mirrors the 'tskit C' API. Users should explore the 'RcppTskit' help pages of 'R' functions, while developers should explore the 'RcppTskit:::rtsk_*' low-level 'R' and 'C++'' functions.https://github.com/r-universe/highlanderlab/actions/runs/39229162951Thu, 20 Aug 2026 20:55:41 GMTRcppTskit0.3.0successhttps://highlanderlab.r-universe.devhttps://github.com/highlanderlab/RcppTskitRcppTskit_intro.qmdRcppTskit_intro.htmlRcppTskit: Working with tree sequences in R2026-01-27 01:47:372026-04-10 06:03:43gregor.gorjanc@gmail.com (Gregor Gorjanc)This is a demo package that shows how to link to and import from 'RcppTskit' package, which provides 'R' access to 'tskit' C API.https://github.com/r-universe/highlanderlab/actions/runs/37914500207Mon, 02 Mar 2026 10:03:54 GMTRcppTskitTestLinking0.1.0successhttps://highlanderlab.r-universe.devhttps://github.com/HighlanderLab/RcppTskitTestLinking